IL_4V7I_090

3D structure

PDB id

4V7I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome-SecY complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.6 Å

Loop

Sequence

AUG*CUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7I_090 not in the Motif Atlas

Homologous match to IL_7RQB_084

Geometric discrepancy: 0.4005

The information below is about IL_7RQB_084

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7I|1|A8|A|2108
4V7I|1|A8|U|2109
4V7I|1|A8|G|2110
*
4V7I|1|A8|C|2179
4V7I|1|A8|U|2180
4V7I|1|A8|U|2181

Current chains

Chain A8

23S ribosomal RNA

Nearby chains

Chain A5

50S ribosomal protein L1