IL_4V7I_140
3D structure
- PDB id
- 4V7I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome-SecY complex.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.6 Å
Loop
- Sequence
- GGAGG*CGUUAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7I_140 not in the Motif Atlas
- Homologous match to IL_5J7L_022
- Geometric discrepancy: 0.2577
- The information below is about IL_5J7L_022
- Detailed Annotation
- tSH-tHW-tWW
- Broad Annotation
- No text annotation
- Motif group
- IL_88269.4
- Basepair signature
- cWW-tWW-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
4V7I|1|BA|G|446
4V7I|1|BA|G|447
4V7I|1|BA|A|448
4V7I|1|BA|G|449
4V7I|1|BA|G|450
*
4V7I|1|BA|C|483
4V7I|1|BA|G|484
4V7I|1|BA|U|485
4V7I|1|BA|U|486
4V7I|1|BA|A|487
4V7I|1|BA|C|488
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BD
- 30S ribosomal protein S4
- Chain BP
- 30S ribosomal protein S16
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