IL_4V7I_160

3D structure

PDB id

4V7I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome-SecY complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.6 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

4V7I|1|BA|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7I_160 not in the Motif Atlas

Homologous match to IL_4LFB_036

Geometric discrepancy: 0.3284

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.13

Basepair signature

cWW-L-cWW

Number of instances in this motif group

49

Unit IDs

4V7I|1|BA|G|925
4V7I|1|BA|G|926
4V7I|1|BA|G|927
*
4V7I|1|BA|U|1390
4V7I|1|BA|U|1391

Current chains

Chain BA

16S ribosomal RNA

Nearby chains