IL_4V7J_172

3D structure

PDB id

4V7J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelE nuclease bound to the 70S ribosome (precleavage state)

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGGAUUG*CAUGAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7J|1|Aa|C|1303
4V7J|1|Aa|G|1304
4V7J|1|Aa|G|1305
4V7J|1|Aa|A|1306
4V7J|1|Aa|U|1307
4V7J|1|Aa|U|1308
4V7J|1|Aa|G|1309
*
4V7J|1|Aa|C|1328
4V7J|1|Aa|A|1329
4V7J|1|Aa|U|1330
4V7J|1|Aa|G|1331
4V7J|1|Aa|A|1332
4V7J|1|Aa|A|1333
4V7J|1|Aa|G|1334

Current chains

Chain Aa

RNA (1504-MER)

Nearby chains

Chain Am

30S ribosomal protein S13

Chain Au

30S ribosomal protein Thx