IL_4V7J_350

3D structure

PDB id

4V7J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelE nuclease bound to the 70S ribosome (precleavage state)

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GUUG*CACUC

Length

9 nucleotides

Bulged bases

4V7J|1|Ba|U|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7J|1|Ba|G|1124
4V7J|1|Ba|U|1125
4V7J|1|Ba|U|1126
4V7J|1|Ba|G|1127
*
4V7J|1|Ba|C|1145
4V7J|1|Ba|A|1146
4V7J|1|Ba|C|1147
4V7J|1|Ba|U|1148
4V7J|1|Ba|C|1149

Current chains

Chain Ba

RNA (1504-MER)

Nearby chains

Chain Bi

30S ribosomal protein S9

Chain Bj

30S ribosomal protein S10