IL_4V7K_174
3D structure
- PDB id
- 4V7K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- 4V7K|1|Aa|A|1492
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7K_174 not in the Motif Atlas
- Geometric match to IL_2ET8_003
- Geometric discrepancy: 0.313
- The information below is about IL_2ET8_003
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_08770.1
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
4V7K|1|Aa|C|1407
4V7K|1|Aa|A|1408
4V7K|1|Aa|C|1409
*
4V7K|1|Aa|G|1491
4V7K|1|Aa|A|1492
4V7K|1|Aa|A|1493
4V7K|1|Aa|G|1494
Current chains
- Chain Aa
- RNA (1504-MER)
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain Al
- 30S ribosomal protein S12
- Chain Ax
- RNA (5'-R(*A*AP*GP*UP*AP*AP*AP*AP*AP*UP*GP*UP*A*(CCC))-3')
- Chain Ay
- Toxin relE
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