IL_4V7K_344
3D structure
- PDB id
- 4V7K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GG*UCAGC
- Length
- 7 nucleotides
- Bulged bases
- 4V7K|1|Ba|C|1200, 4V7K|1|Ba|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7K_344 not in the Motif Atlas
- Homologous match to IL_5J7L_048
- Geometric discrepancy: 0.1204
- The information below is about IL_5J7L_048
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_95583.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
4V7K|1|Ba|G|1057
4V7K|1|Ba|G|1058
*
4V7K|1|Ba|U|1199
4V7K|1|Ba|C|1200
4V7K|1|Ba|A|1201
4V7K|1|Ba|G|1202
4V7K|1|Ba|C|1203
Current chains
- Chain Ba
- RNA (1504-MER)
Nearby chains
- Chain Bc
- 30S ribosomal protein S3
- Chain Bj
- 30S ribosomal protein S10
- Chain Bn
- 30S ribosomal protein S14 type Z
- Chain By
- Toxin relE
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