IL_4V7K_355
3D structure
- PDB id
- 4V7K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 4V7K|1|Ba|C|1400, 4V7K|1|Ba|A|1503
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7K_355 not in the Motif Atlas
- Geometric match to IL_4V88_463
- Geometric discrepancy: 0.2585
- The information below is about IL_4V88_463
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
4V7K|1|Ba|C|1399
4V7K|1|Ba|C|1400
4V7K|1|Ba|G|1401
*
4V7K|1|Ba|C|1501
4V7K|1|Ba|A|1502
4V7K|1|Ba|A|1503
4V7K|1|Ba|G|1504
Current chains
- Chain Ba
- RNA (1504-MER)
Nearby chains
- Chain Bv
- Transfer RNA; tRNA
- Chain Bx
- RNA (5'-R(*A*AP*GP*UP*AP*AP*AP*AP*AP*UP*GP*UP*A*(CCC))-3')
- Chain By
- Toxin relE
Coloring options: