IL_4V7L_034
3D structure
- PDB id
- 4V7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structures of viomycin bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GCC*GGC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: GCC,GGC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7L_034 not in the Motif Atlas
- Geometric match to IL_3SJ2_001
- Geometric discrepancy: 0.2007
- The information below is about IL_3SJ2_001
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_10167.6
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 51
Unit IDs
4V7L|1|AA|G|588
4V7L|1|AA|C|589
4V7L|1|AA|C|590
*
4V7L|1|AA|G|649
4V7L|1|AA|G|650
4V7L|1|AA|C|651
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AH
- 30S ribosomal protein S8
- Chain AO
- 30S ribosomal protein S15
Coloring options: