IL_4V7L_088
3D structure
- PDB id
- 4V7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structures of viomycin bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CCAG*UGGGG
- Length
- 9 nucleotides
- Bulged bases
- 4V7L|1|BA|G|352
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7L_088 not in the Motif Atlas
- Geometric match to IL_7RQB_057
- Geometric discrepancy: 0.3722
- The information below is about IL_7RQB_057
- Detailed Annotation
- tSH-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_04059.1
- Basepair signature
- cWW-tWH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
4V7L|1|BA|C|287
4V7L|1|BA|C|288
4V7L|1|BA|A|289
4V7L|1|BA|G|290
*
4V7L|1|BA|U|350
4V7L|1|BA|G|351
4V7L|1|BA|G|352
4V7L|1|BA|G|353
4V7L|1|BA|G|354
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: