IL_4V7L_451
3D structure
- PDB id
- 4V7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structures of viomycin bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GCGAG*UCCGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7L_451 not in the Motif Atlas
- Geometric match to IL_7VYX_004
- Geometric discrepancy: 0.2796
- The information below is about IL_7VYX_004
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
4V7L|1|DA|G|950
4V7L|1|DA|C|951
4V7L|1|DA|G|952
4V7L|1|DA|A|953
4V7L|1|DA|G|954
*
4V7L|1|DA|U|963
4V7L|1|DA|C|964
4V7L|1|DA|C|965
4V7L|1|DA|G|966
4V7L|1|DA|C|967
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain DB
- 5S ribosomal RNA; 5S rRNA
- Chain DQ
- 50S ribosomal protein L16
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