IL_4V7M_169
3D structure
- PDB id
- 4V7M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structures of Capreomycin bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- UGG*CCA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: UGG,CCA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7M_169 not in the Motif Atlas
- Geometric match to IL_7RQB_030
- Geometric discrepancy: 0.2179
- The information below is about IL_7RQB_030
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.4
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
4V7M|1|BA|U|2684
4V7M|1|BA|G|2685
4V7M|1|BA|G|2686
*
4V7M|1|BA|C|2723
4V7M|1|BA|C|2724
4V7M|1|BA|A|2725
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BE
- 50S ribosomal protein L3
- Chain BO
- 50S ribosomal protein L14
- Chain BR
- 50S ribosomal protein L17
- Chain BT
- 50S ribosomal protein L19
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