IL_4V7M_357

3D structure

PDB id

4V7M (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structures of Capreomycin bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

CCGUGCC*GGUGCGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7M|1|DB|C|5
4V7M|1|DB|C|6
4V7M|1|DB|G|7
4V7M|1|DB|U|8
4V7M|1|DB|G|9
4V7M|1|DB|C|10
4V7M|1|DB|C|11
*
4V7M|1|DB|G|110
4V7M|1|DB|G|111
4V7M|1|DB|U|112
4V7M|1|DB|G|113
4V7M|1|DB|C|114
4V7M|1|DB|G|115
4V7M|1|DB|G|116

Current chains

Chain DB

5S ribosomal RNA

Nearby chains

Chain D0

50S ribosomal protein L27

Chain DA

Large subunit ribosomal RNA; LSU rRNA

Chain DS

50S ribosomal protein L18