IL_4V7P_010
3D structure
- PDB id
- 4V7P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Recognition of the amber stop codon by release factor RF1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.62 Å
Loop
- Sequence
- CCCC*GG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7P_010 not in the Motif Atlas
- Geometric match to IL_7Q80_003
- Geometric discrepancy: 0.2041
- The information below is about IL_7Q80_003
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_84476.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
4V7P|1|AA|C|136
4V7P|1|AA|C|136|||A
4V7P|1|AA|C|136|||B
4V7P|1|AA|C|137
*
4V7P|1|AA|G|226
4V7P|1|AA|G|227
Current chains
- Chain AA
- 16S rRNA (1504-MER)
Nearby chains
- Chain AP
- 30S ribosomal protein S16
- Chain AU
- 30S ribosomal protein Thx
Coloring options: