IL_4V7P_076
3D structure
- PDB id
- 4V7P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Recognition of the amber stop codon by release factor RF1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.62 Å
Loop
- Sequence
- GUCGUG*CC
- Length
- 8 nucleotides
- Bulged bases
- 4V7P|1|BA|U|271|||D
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7P_076 not in the Motif Atlas
- Geometric match to IL_7Q82_001
- Geometric discrepancy: 0.1369
- The information below is about IL_7Q82_001
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_82107.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
4V7P|1|BA|G|271
4V7P|1|BA|U|271|||A
4V7P|1|BA|C|271|||B
4V7P|1|BA|G|271|||C
4V7P|1|BA|U|271|||D
4V7P|1|BA|G|272
*
4V7P|1|BA|C|365|||A
4V7P|1|BA|C|366|||B
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BH
- 50S ribosomal protein L9
Coloring options: