IL_4V7P_272
3D structure
- PDB id
- 4V7P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Recognition of the amber stop codon by release factor RF1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.62 Å
Loop
- Sequence
- GCGUAGGAUAG*CC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7P_272 not in the Motif Atlas
- Homologous match to IL_3U4M_002
- Geometric discrepancy: 0.398
- The information below is about IL_3U4M_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32056.1
- Basepair signature
- cWW-L-cWW-L-L-tWH-R-L-R-L
- Number of instances in this motif group
- 3
Unit IDs
4V7P|1|CA|G|2110
4V7P|1|CA|C|2111
4V7P|1|CA|G|2112
4V7P|1|CA|U|2113
4V7P|1|CA|A|2114
4V7P|1|CA|G|2115
4V7P|1|CA|G|2116
4V7P|1|CA|A|2117
4V7P|1|CA|U|2118
4V7P|1|CA|A|2119
4V7P|1|CA|G|2120
*
4V7P|1|CA|C|2178
4V7P|1|CA|C|2179
Current chains
- Chain CA
- 23S ribosomal RNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
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