IL_4V7R_052
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- CGA*UCUUUGG
- Length
- 10 nucleotides
- Bulged bases
- 4V7R|1|A1|C|1096
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7R_052 not in the Motif Atlas
- Geometric match to IL_2W2H_002
- Geometric discrepancy: 0.2711
- The information below is about IL_2W2H_002
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_19557.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
4V7R|1|A1|C|1034
4V7R|1|A1|G|1035
4V7R|1|A1|A|1036
*
4V7R|1|A1|U|1095
4V7R|1|A1|C|1096
4V7R|1|A1|U|1097
4V7R|1|A1|U|1098
4V7R|1|A1|U|1099
4V7R|1|A1|G|1100
4V7R|1|A1|G|1101
Current chains
- Chain A1
- 18S ribosomal RNA
Nearby chains
- Chain AB
- 40S ribosomal protein S2
- Chain AO
- 40S ribosomal protein S22-A
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