IL_4V7R_054
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- GUG*CC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7R_054 not in the Motif Atlas
- Geometric match to IL_5J7L_005
- Geometric discrepancy: 0.177
- The information below is about IL_5J7L_005
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_82107.5
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 31
Unit IDs
4V7R|1|A1|G|1051
4V7R|1|A1|U|1052
4V7R|1|A1|G|1053
*
4V7R|1|A1|C|1066
4V7R|1|A1|C|1067
Current chains
- Chain A1
- 18S ribosomal RNA
Nearby chains
- Chain AA
- 40S ribosomal protein S0-A
- Chain Ac
- Unassigned secondary structure
Coloring options: