3D structure

PDB id
4V7R (explore in PDB, NAKB, or RNA 3D Hub)
Description
Yeast 80S ribosome.
Experimental method
X-RAY DIFFRACTION
Resolution
4 Å

Loop

Sequence
UGACCUCAA*UUGAGCGUCA
Length
19 nucleotides
Bulged bases
4V7R|1|B3|C|151
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V7R|1|B1|U|4
4V7R|1|B1|G|5
4V7R|1|B1|A|6
4V7R|1|B1|C|7
4V7R|1|B1|C|8
4V7R|1|B1|U|9
4V7R|1|B1|C|10
4V7R|1|B1|A|11
4V7R|1|B1|A|12
*
4V7R|1|B3|U|146
4V7R|1|B3|U|147
4V7R|1|B3|G|148
4V7R|1|B3|A|149
4V7R|1|B3|G|150
4V7R|1|B3|C|151
4V7R|1|B3|G|152
4V7R|1|B3|U|153
4V7R|1|B3|C|154
4V7R|1|B3|A|155

Current chains

Chain B1
25S ribosomal RNA
Chain B3
5.8S ribosomal RNA

Nearby chains

Chain BH
60S ribosomal protein L8-A
Chain BO
60S ribosomal protein L15-A

Coloring options:

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