3D structure

PDB id
4V7R (explore in PDB, NAKB, or RNA 3D Hub)
Description
Yeast 80S ribosome.
Experimental method
X-RAY DIFFRACTION
Resolution
4 Å

Loop

Sequence
UCGUAU*AAGA
Length
10 nucleotides
Bulged bases
4V7R|1|B1|A|1103
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V7R|1|B1|U|976
4V7R|1|B1|C|977
4V7R|1|B1|G|978
4V7R|1|B1|U|979
4V7R|1|B1|A|980
4V7R|1|B1|U|981
*
4V7R|1|B1|A|1102
4V7R|1|B1|A|1103
4V7R|1|B1|G|1104
4V7R|1|B1|A|1105

Current chains

Chain B1
25S ribosomal RNA

Nearby chains

Chain BG
60S ribosomal protein L7-A
Chain BR
60S ribosomal protein L18

Coloring options:

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