IL_4V7R_184
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- GGAA*UC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7R_184 not in the Motif Atlas
- Geometric match to IL_5TBW_076
- Geometric discrepancy: 0.15
- The information below is about IL_5TBW_076
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- Major groove platform
- Motif group
- IL_50694.4
- Basepair signature
- cWW-cWW-tSH-cWW-R
- Number of instances in this motif group
- 28
Unit IDs
4V7R|1|B1|G|1898
4V7R|1|B1|G|1899
4V7R|1|B1|A|1900
4V7R|1|B1|A|1901
*
4V7R|1|B1|U|2336
4V7R|1|B1|C|2337
Current chains
- Chain B1
- 25S ribosomal RNA
Nearby chains
- Chain BC
- 60S ribosomal protein L3
- Chain BU
- 60S ribosomal protein L23
Coloring options: