IL_4V7R_188

3D structure

PDB id

4V7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

GG*CAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7R_188 not in the Motif Atlas

Homologous match to IL_8C3A_086

Geometric discrepancy: 0.5306

The information below is about IL_8C3A_086

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_74125.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

4V7R|1|B1|G|1947
4V7R|1|B1|G|1948
*
4V7R|1|B1|C|2098
4V7R|1|B1|A|2099
4V7R|1|B1|A|2100
4V7R|1|B1|C|2101

Current chains

Chain B1

25S ribosomal RNA

Nearby chains

Chain BS

60S ribosomal protein L19