IL_4V7R_208

3D structure

PDB id

4V7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

GGGUGUAGAAUAA*UACC

Length

17 nucleotides

Bulged bases

4V7R|1|B1|U|2453, 4V7R|1|B1|A|2458, 4V7R|1|B1|U|2460

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7R|1|B1|G|2450
4V7R|1|B1|G|2451
4V7R|1|B1|G|2452
4V7R|1|B1|U|2453
4V7R|1|B1|G|2454
4V7R|1|B1|U|2455
4V7R|1|B1|A|2456
4V7R|1|B1|G|2457
4V7R|1|B1|A|2458
4V7R|1|B1|A|2459
4V7R|1|B1|U|2460
4V7R|1|B1|A|2461
4V7R|1|B1|A|2462
*
4V7R|1|B1|U|2493
4V7R|1|B1|A|2494
4V7R|1|B1|C|2495
4V7R|1|B1|C|2496

Current chains

Chain B1

25S ribosomal RNA

Nearby chains

Chain BA

60S ribosomal protein L1