IL_4V7R_303
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- UUGUCAG*CUUGGAUUUA
- Length
- 17 nucleotides
- Bulged bases
- 4V7R|1|C1|G|913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7R_303 not in the Motif Atlas
- Homologous match to IL_8C3A_440
- Geometric discrepancy: 0.3902
- The information below is about IL_8C3A_440
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_22252.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
4V7R|1|C1|U|893
4V7R|1|C1|U|894
4V7R|1|C1|G|895
4V7R|1|C1|U|896
4V7R|1|C1|C|897
4V7R|1|C1|A|898
4V7R|1|C1|G|899
*
4V7R|1|C1|C|910
4V7R|1|C1|U|911
4V7R|1|C1|U|912
4V7R|1|C1|G|913
4V7R|1|C1|G|914
4V7R|1|C1|A|915
4V7R|1|C1|U|916
4V7R|1|C1|U|917
4V7R|1|C1|U|918
4V7R|1|C1|A|919
Current chains
- Chain C1
- 18S ribosomal RNA
Nearby chains
- Chain CH
- 40S ribosomal protein S14-A
- Chain D1
- Large subunit ribosomal RNA; LSU rRNA
- Chain DB
- 60S ribosomal protein L2
Coloring options: