IL_4V7R_317

3D structure

PDB id

4V7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

AUAAGGAUUG*CUUGAUUU

Length

18 nucleotides

Bulged bases

4V7R|1|C1|A|1227, 4V7R|1|C1|A|1230, 4V7R|1|C1|G|1255

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7R|1|C1|A|1224
4V7R|1|C1|U|1225
4V7R|1|C1|A|1226
4V7R|1|C1|A|1227
4V7R|1|C1|G|1228
4V7R|1|C1|G|1229
4V7R|1|C1|A|1230
4V7R|1|C1|U|1231
4V7R|1|C1|U|1232
4V7R|1|C1|G|1233
*
4V7R|1|C1|C|1252
4V7R|1|C1|U|1253
4V7R|1|C1|U|1254
4V7R|1|C1|G|1255
4V7R|1|C1|A|1256
4V7R|1|C1|U|1257
4V7R|1|C1|U|1258
4V7R|1|C1|U|1259

Current chains

Chain C1

18S ribosomal RNA

Nearby chains

Chain CK

40S ribosomal protein S17-A