IL_4V7R_324
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- GGA*UUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7R_324 not in the Motif Atlas
- Geometric match to IL_3SZX_003
- Geometric discrepancy: 0.1543
- The information below is about IL_3SZX_003
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
4V7R|1|C1|G|1294
4V7R|1|C1|G|1295
4V7R|1|C1|A|1296
*
4V7R|1|C1|U|1301
4V7R|1|C1|U|1302
4V7R|1|C1|U|1303
Current chains
- Chain C1
- 18S ribosomal RNA
Nearby chains
- Chain CA
- 40S ribosomal protein S0-A
- Chain CB
- 40S ribosomal protein S2
Coloring options: