IL_4V7R_332

3D structure

PDB id

4V7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

GUCUAAC*GUAAUC

Length

13 nucleotides

Bulged bases

4V7R|1|C1|C|1490, 4V7R|1|C1|U|1491, 4V7R|1|C1|A|1515, 4V7R|1|C1|A|1516, 4V7R|1|C1|U|1517

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7R|1|C1|G|1488
4V7R|1|C1|U|1489
4V7R|1|C1|C|1490
4V7R|1|C1|U|1491
4V7R|1|C1|A|1492
4V7R|1|C1|A|1493
4V7R|1|C1|C|1494
*
4V7R|1|C1|G|1513
4V7R|1|C1|U|1514
4V7R|1|C1|A|1515
4V7R|1|C1|A|1516
4V7R|1|C1|U|1517
4V7R|1|C1|C|1518

Current chains

Chain C1

18S ribosomal RNA

Nearby chains

Chain CC

40S ribosomal protein S3

Chain CN

40S ribosomal protein S20

Chain CS

40S ribosomal protein S29-A