IL_4V7R_359
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- AGA*UCU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: AGA,UCU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7R_359 not in the Motif Atlas
- Geometric match to IL_4WF9_042
- Geometric discrepancy: 0.1953
- The information below is about IL_4WF9_042
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
4V7R|1|D1|A|334
4V7R|1|D1|G|335
4V7R|1|D1|A|336
*
4V7R|1|D3|U|27
4V7R|1|D3|C|28
4V7R|1|D3|U|29
Current chains
- Chain D1
- 25S ribosomal RNA
- Chain D3
- 5.8S ribosomal RNA
Nearby chains
- Chain DD
- 60S ribosomal protein L4-A
- Chain DX
- 60S ribosomal protein L26-A
Coloring options: