IL_4V7R_361
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- GAAC*GAGUGAAAAAGUAC
- Length
- 18 nucleotides
- Bulged bases
- 4V7R|1|D1|A|398, 4V7R|1|D1|A|402
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7R_361 not in the Motif Atlas
- Homologous match to IL_8C3A_015
- Geometric discrepancy: 0.3798
- The information below is about IL_8C3A_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60992.7
- Basepair signature
- cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L
- Number of instances in this motif group
- 6
Unit IDs
4V7R|1|D1|G|376
4V7R|1|D1|A|377
4V7R|1|D1|A|378
4V7R|1|D1|C|379
*
4V7R|1|D1|G|390
4V7R|1|D1|A|391
4V7R|1|D1|G|392
4V7R|1|D1|U|393
4V7R|1|D1|G|394
4V7R|1|D1|A|395
4V7R|1|D1|A|396
4V7R|1|D1|A|397
4V7R|1|D1|A|398
4V7R|1|D1|A|399
4V7R|1|D1|G|400
4V7R|1|D1|U|401
4V7R|1|D1|A|402
4V7R|1|D1|C|403
Current chains
- Chain D1
- 25S ribosomal RNA
Nearby chains
- Chain D3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain DQ
- 60S ribosomal protein L17-A
- Chain DX
- 60S ribosomal protein L26-A
- Chain De
- 60S ribosomal protein L39
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