IL_4V7R_408
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- CUCAUCAGACACCACAAAA*UGAAAAUGGAUGGCGCUCAAG
- Length
- 40 nucleotides
- Bulged bases
- 4V7R|1|D1|A|1190, 4V7R|1|D1|U|1191, 4V7R|1|D1|A|1195, 4V7R|1|D1|C|1199, 4V7R|1|D1|A|1302, 4V7R|1|D1|C|1316
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V7R|1|D1|C|1187
4V7R|1|D1|U|1188
4V7R|1|D1|C|1189
4V7R|1|D1|A|1190
4V7R|1|D1|U|1191
4V7R|1|D1|C|1192
4V7R|1|D1|A|1193
4V7R|1|D1|G|1194
4V7R|1|D1|A|1195
4V7R|1|D1|C|1196
4V7R|1|D1|A|1197
4V7R|1|D1|C|1198
4V7R|1|D1|C|1199
4V7R|1|D1|A|1200
4V7R|1|D1|C|1201
4V7R|1|D1|A|1202
4V7R|1|D1|A|1203
4V7R|1|D1|A|1204
4V7R|1|D1|A|1205
*
4V7R|1|D1|U|1299
4V7R|1|D1|G|1300
4V7R|1|D1|A|1301
4V7R|1|D1|A|1302
4V7R|1|D1|A|1303
4V7R|1|D1|A|1304
4V7R|1|D1|U|1305
4V7R|1|D1|G|1306
4V7R|1|D1|G|1307
4V7R|1|D1|A|1308
4V7R|1|D1|U|1309
4V7R|1|D1|G|1310
4V7R|1|D1|G|1311
4V7R|1|D1|C|1312
4V7R|1|D1|G|1313
4V7R|1|D1|C|1314
4V7R|1|D1|U|1315
4V7R|1|D1|C|1316
4V7R|1|D1|A|1317
4V7R|1|D1|A|1318
4V7R|1|D1|G|1319
Current chains
- Chain D1
- 25S ribosomal RNA
Nearby chains
- Chain D2
- 5S ribosomal RNA; 5S rRNA
- Chain DC
- 60S ribosomal protein L3
- Chain DF
- 60S ribosomal protein L6-A
- Chain DI
- 60S ribosomal protein L9-A
- Chain DJ
- 60S ribosomal protein L10
- Chain DP
- 60S ribosomal protein L16-A
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