IL_4V7R_505
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- AGAUAAAAAAUCAAUG*CUCUUUGAUGAUUCAU
- Length
- 32 nucleotides
- Bulged bases
- 4V7R|1|A1|A|217, 4V7R|1|A1|U|238, 4V7R|1|A1|C|239, 4V7R|1|A1|U|240, 4V7R|1|A1|U|248, 4V7R|1|A1|U|249
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V7R|1|A1|A|213
4V7R|1|A1|G|214
4V7R|1|A1|A|215
4V7R|1|A1|U|216
4V7R|1|A1|A|217
4V7R|1|A1|A|218
4V7R|1|A1|A|219
4V7R|1|A1|A|220
4V7R|1|A1|A|221
4V7R|1|A1|A|222
4V7R|1|A1|U|223
4V7R|1|A1|C|224
4V7R|1|A1|A|225
4V7R|1|A1|A|226
4V7R|1|A1|U|227
4V7R|1|A1|G|228
*
4V7R|1|A1|C|237
4V7R|1|A1|U|238
4V7R|1|A1|C|239
4V7R|1|A1|U|240
4V7R|1|A1|U|241
4V7R|1|A1|U|242
4V7R|1|A1|G|243
4V7R|1|A1|A|244
4V7R|1|A1|U|245
4V7R|1|A1|G|246
4V7R|1|A1|A|247
4V7R|1|A1|U|248
4V7R|1|A1|U|249
4V7R|1|A1|C|250
4V7R|1|A1|A|251
4V7R|1|A1|U|252
Current chains
- Chain A1
- 18S ribosomal RNA
Nearby chains
- Chain AF
- 40S ribosomal protein S11
- Chain Ad
- Unassigned secondary structure
- Chain Ah
- Unassigned secondary structure
Coloring options: