IL_4V7R_511

3D structure

PDB id

4V7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

UUGGUG*CAGCUG

Length

12 nucleotides

Bulged bases

4V7R|1|B1|A|578, 4V7R|1|B1|U|581

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7R|1|B1|U|508
4V7R|1|B1|U|509
4V7R|1|B1|G|510
4V7R|1|B1|G|511
4V7R|1|B1|U|512
4V7R|1|B1|G|513
*
4V7R|1|B1|C|577
4V7R|1|B1|A|578
4V7R|1|B1|G|579
4V7R|1|B1|C|580
4V7R|1|B1|U|581
4V7R|1|B1|G|582

Current chains

Chain B1

25S ribosomal RNA

Nearby chains

Chain BF

60S ribosomal protein L6-A

Chain BG

60S ribosomal protein L7-A