IL_4V7R_530

3D structure

PDB id

4V7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

UGACGAAGC*GUCGAA

Length

15 nucleotides

Bulged bases

4V7R|1|D1|C|1391, 4V7R|1|D1|A|1393

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7R|1|D1|U|1388
4V7R|1|D1|G|1389
4V7R|1|D1|A|1390
4V7R|1|D1|C|1391
4V7R|1|D1|G|1392
4V7R|1|D1|A|1393
4V7R|1|D1|A|1394
4V7R|1|D1|G|1395
4V7R|1|D1|C|1396
*
4V7R|1|D1|G|1414
4V7R|1|D1|U|1415
4V7R|1|D1|C|1416
4V7R|1|D1|G|1417
4V7R|1|D1|A|1418
4V7R|1|D1|A|1419

Current chains

Chain D1

25S ribosomal RNA

Nearby chains

Chain D3

5.8S ribosomal RNA; 5.8S rRNA

Chain DD

60S ribosomal protein L4-A

Chain Db

60S ribosomal protein L32