IL_4V7R_535

3D structure

PDB id

4V7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

UGGCUAACCUUG*CUUGGCGAACCA

Length

24 nucleotides

Bulged bases

4V7R|1|A1|U|710, 4V7R|1|A1|U|711, 4V7R|1|A1|G|732, 4V7R|1|A1|A|734

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7R|1|A1|U|701
4V7R|1|A1|G|702
4V7R|1|A1|G|703
4V7R|1|A1|C|704
4V7R|1|A1|U|705
4V7R|1|A1|A|706
4V7R|1|A1|A|707
4V7R|1|A1|C|708
4V7R|1|A1|C|709
4V7R|1|A1|U|710
4V7R|1|A1|U|711
4V7R|1|A1|G|712
*
4V7R|1|A1|C|726
4V7R|1|A1|U|727
4V7R|1|A1|U|728
4V7R|1|A1|G|729
4V7R|1|A1|G|730
4V7R|1|A1|C|731
4V7R|1|A1|G|732
4V7R|1|A1|A|733
4V7R|1|A1|A|734
4V7R|1|A1|C|735
4V7R|1|A1|C|736
4V7R|1|A1|A|737

Current chains

Chain A1

18S ribosomal RNA

Nearby chains