3D structure

PDB id
4V7S (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the E. coli ribosome bound to telithromycin.
Experimental method
X-RAY DIFFRACTION
Resolution
3.25 Å

Loop

Sequence
GCAC*GUUCCC
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V7S_231 not in the Motif Atlas
Geometric match to IL_6CZR_149
Geometric discrepancy: 0.2566
The information below is about IL_6CZR_149
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_93211.1
Basepair signature
cWW-cWS-cWW-L-R-cWW-L
Number of instances in this motif group
2

Unit IDs

4V7S|1|CA|G|933
4V7S|1|CA|C|934
4V7S|1|CA|A|935
4V7S|1|CA|C|936
*
4V7S|1|CA|G|1379
4V7S|1|CA|U|1380
4V7S|1|CA|U|1381
4V7S|1|CA|C|1382
4V7S|1|CA|C|1383
4V7S|1|CA|C|1384

Current chains

Chain CA
16S rRNA

Nearby chains

Chain CG
30S ribosomal protein S7
Chain CI
30S ribosomal protein S9

Coloring options:


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