IL_4V7W_177

3D structure

PDB id

4V7W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAUG*CAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7W_177 not in the Motif Atlas

Geometric match to IL_4P3T_002

Geometric discrepancy: 0.2858

The information below is about IL_4P3T_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01472.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

5

Unit IDs

4V7W|1|CA|C|54
4V7W|1|CA|A|55
4V7W|1|CA|U|56
4V7W|1|CA|G|57
*
4V7W|1|CA|C|355
4V7W|1|CA|A|356
4V7W|1|CA|G|357

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CT

30S ribosomal protein S20