IL_4V7Y_308

3D structure

PDB id

4V7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUCGC*GCGGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7Y_308 not in the Motif Atlas

Geometric match to IL_5TBW_121

Geometric discrepancy: 0.3204

The information below is about IL_5TBW_121

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05145.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

13

Unit IDs

4V7Y|1|DA|G|2101
4V7Y|1|DA|U|2102
4V7Y|1|DA|C|2103
4V7Y|1|DA|G|2104
4V7Y|1|DA|C|2105
*
4V7Y|1|DA|G|2184
4V7Y|1|DA|C|2185
4V7Y|1|DA|G|2186
4V7Y|1|DA|G|2187
4V7Y|1|DA|C|2188

Current chains

Chain DA

23S ribosomal RNA

Nearby chains