IL_4V85_031

3D structure

PDB id

4V85 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

4V85|1|AA|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V85_031 not in the Motif Atlas

Geometric match to IL_4LFB_022

Geometric discrepancy: 0.0767

The information below is about IL_4LFB_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_20847.1

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

4V85|1|AA|C|569
4V85|1|AA|G|570
4V85|1|AA|U|571
4V85|1|AA|A|572
4V85|1|AA|A|573
4V85|1|AA|A|574
4V85|1|AA|G|575
*
4V85|1|AA|C|880
4V85|1|AA|G|881

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AL

30S ribosomal protein S12 1

Chain AQ

30S ribosomal protein S17