IL_4V85_065
3D structure
- PDB id
- 4V85 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V85_065 not in the Motif Atlas
- Geometric match to IL_3C3Z_002
- Geometric discrepancy: 0.23
- The information below is about IL_3C3Z_002
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_53541.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
4V85|1|AA|C|1407
4V85|1|AA|A|1408
4V85|1|AA|C|1409
*
4V85|1|AA|G|1491
4V85|1|AA|A|1492
4V85|1|AA|A|1493
4V85|1|AA|G|1494
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AL
- 30S ribosomal protein S12 1
- Chain AV
- messenger RNA
- Chain AY
- Viomycin
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: