IL_4V87_233
3D structure
- PDB id
- 4V87 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UACAAAG*CAAAAAG
- Length
- 14 nucleotides
- Bulged bases
- 4V87|1|CA|A|1286
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V87_233 not in the Motif Atlas
- Homologous match to IL_4LFB_051
- Geometric discrepancy: 0.1069
- The information below is about IL_4LFB_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12056.1
- Basepair signature
- cWW-L-R-R-bif-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V87|1|CA|U|1247
4V87|1|CA|A|1248
4V87|1|CA|C|1249
4V87|1|CA|A|1250
4V87|1|CA|A|1251
4V87|1|CA|A|1252
4V87|1|CA|G|1253
*
4V87|1|CA|C|1284
4V87|1|CA|A|1285
4V87|1|CA|A|1286
4V87|1|CA|A|1287
4V87|1|CA|A|1288
4V87|1|CA|A|1289
4V87|1|CA|G|1290
Current chains
- Chain CA
- 16S ribosomal RNA
Nearby chains
- Chain CJ
- 30S RIBOSOMAL PROTEIN S7
- Chain CL
- 30S RIBOSOMAL PROTEIN S9
- Chain CM
- 30S RIBOSOMAL PROTEIN S10
- Chain CQ
- 30S RIBOSOMAL PROTEIN S14
- Chain CX
- 30S RIBOSOMAL PROTEIN THX
Coloring options: