IL_4V87_372
3D structure
- PDB id
- 4V87 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAAU*GGAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V87_372 not in the Motif Atlas
- Homologous match to IL_4LFB_065
- Geometric discrepancy: 0.0645
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
4V87|1|BA|G|673
4V87|1|BA|G|674
4V87|1|BA|A|675
4V87|1|BA|A|676
4V87|1|BA|U|677
*
4V87|1|BA|G|713
4V87|1|BA|G|714
4V87|1|BA|A|715
4V87|1|BA|A|716
4V87|1|BA|C|717
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain AD
- 50S ribosomal protein L2
- Chain BI
- 30S RIBOSOMAL PROTEIN S6
- Chain BN
- 30S RIBOSOMAL PROTEIN S11
- Chain BU
- 30S RIBOSOMAL PROTEIN S18
Coloring options: