IL_4V88_072
3D structure
- PDB id
- 4V88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the eukaryotic ribosome at 3.0 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UUAAC*GGAAGA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V88_072 not in the Motif Atlas
- Homologous match to IL_5TBW_071
- Geometric discrepancy: 0.0521
- The information below is about IL_5TBW_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69313.1
- Basepair signature
- cWW-tWH-tHH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V88|1|A1|U|1694
4V88|1|A1|U|1695
4V88|1|A1|A|1696
4V88|1|A1|A|1697
4V88|1|A1|C|1698
*
4V88|1|A1|G|1747
4V88|1|A1|G|1748
4V88|1|A1|A|1749
4V88|1|A1|A|1750
4V88|1|A1|G|1751
4V88|1|A1|A|1752
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain Bg
- 60S ribosomal protein L34-A
- Chain Bk
- 60S ribosomal protein L38
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