IL_4V88_146
3D structure
- PDB id
- 4V88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the eukaryotic ribosome at 3.0 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UAUAAG*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 4V88|1|A2|U|66, 4V88|1|A2|A|68
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V88_146 not in the Motif Atlas
- Homologous match to IL_4V88_390
- Geometric discrepancy: 0.0929
- The information below is about IL_4V88_390
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87517.1
- Basepair signature
- cWW-L-R-L-R-tHS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V88|1|A2|U|64
4V88|1|A2|A|65
4V88|1|A2|U|66
4V88|1|A2|A|67
4V88|1|A2|A|68
4V88|1|A2|G|69
*
4V88|1|A2|U|82
4V88|1|A2|G|83
4V88|1|A2|A|84
4V88|1|A2|A|85
4V88|1|A2|A|86
Current chains
- Chain A2
- 18S RIBOSOMAL RNA
Nearby chains
- Chain AG
- 40S ribosomal protein S6-A
- Chain AY
- 40S ribosomal protein S24-A
- Chain BW
- 60S ribosomal protein L24-A
Coloring options: