IL_4V88_323
3D structure
- PDB id
- 4V88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the eukaryotic ribosome at 3.0 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AAUAAUG*CUAU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69914.1
- Basepair signature
- cWW-L-L-L-tHS-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
4V88|1|A5|A|1883
4V88|1|A5|A|1884
4V88|1|A5|U|1885
4V88|1|A5|A|1886
4V88|1|A5|A|1887
4V88|1|A5|U|1888
4V88|1|A5|G|1889
*
4V88|1|A5|C|2346
4V88|1|A5|U|2347
4V88|1|A5|A|2348
4V88|1|A5|U|2349
Current chains
- Chain A5
- 25S rRNA
Nearby chains
- Chain DB
- 60S ribosomal protein L3
- Chain DP
- 60S ribosomal protein L17-A
- Chain Dd
- 60S ribosomal protein L31-A
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