IL_4V89_182

3D structure

PDB id

4V89 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CUC*GAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V89_182 not in the Motif Atlas

Geometric match to IL_4P3T_002

Geometric discrepancy: 0.2528

The information below is about IL_4P3T_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01472.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

5

Unit IDs

4V89|1|AA|C|658
4V89|1|AA|U|659
4V89|1|AA|C|660
*
4V89|1|AA|G|745
4V89|1|AA|A|746
4V89|1|AA|A|747
4V89|1|AA|G|748

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AO

30S ribosomal protein S15