IL_4V8B_048
3D structure
- PDB id
- 4V8B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8B_048 not in the Motif Atlas
- Homologous match to IL_4LFB_047
- Geometric discrepancy: 0.0685
- The information below is about IL_4LFB_047
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_68118.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 27
Unit IDs
4V8B|1|AA|G|1061
4V8B|1|AA|U|1062
4V8B|1|AA|C|1063
*
4V8B|1|AA|G|1193
4V8B|1|AA|U|1194
4V8B|1|AA|C|1195
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AF
- 30S RIBOSOMAL PROTEIN S3
- Chain AH
- 30S RIBOSOMAL PROTEIN S5
- Chain AL
- 30S RIBOSOMAL PROTEIN S9
- Chain AM
- 30S RIBOSOMAL PROTEIN S10
- Chain AQ
- 30S RIBOSOMAL PROTEIN S14
Coloring options: