IL_4V8B_207

3D structure

PDB id

4V8B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGU*GCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V8B_207 not in the Motif Atlas

Geometric match to IL_4KR9_002

Geometric discrepancy: 0.2125

The information below is about IL_4KR9_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

4V8B|1|CA|U|603
4V8B|1|CA|G|604
4V8B|1|CA|U|605
*
4V8B|1|CA|G|633
4V8B|1|CA|C|634
4V8B|1|CA|G|635

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CK

30S RIBOSOMAL PROTEIN S8

Chain CT

30S RIBOSOMAL PROTEIN S17