IL_4V8C_181
3D structure
- PDB id
- 4V8C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UG*CAACAAG
- Length
- 9 nucleotides
- Bulged bases
- 4V8C|1|BA|C|1509
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8C_181 not in the Motif Atlas
- Homologous match to IL_7RQB_061
- Geometric discrepancy: 0.3248
- The information below is about IL_7RQB_061
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_52493.1
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
4V8C|1|BA|U|1482
4V8C|1|BA|G|1483
*
4V8C|1|BA|C|1506
4V8C|1|BA|A|1507
4V8C|1|BA|A|1508
4V8C|1|BA|C|1509
4V8C|1|BA|A|1510
4V8C|1|BA|A|1511
4V8C|1|BA|G|1512
Current chains
- Chain BA
- RNA (2912-MER)
Nearby chains
No other chains within 10ÅColoring options: