IL_4V8C_276
3D structure
- PDB id
- 4V8C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GCA*UUCCC
- Length
- 8 nucleotides
- Bulged bases
- 4V8C|1|CA|C|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8C_276 not in the Motif Atlas
- Homologous match to IL_4LFB_037
- Geometric discrepancy: 0.1162
- The information below is about IL_4LFB_037
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_47078.3
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
4V8C|1|CA|G|933
4V8C|1|CA|C|934
4V8C|1|CA|A|935
*
4V8C|1|CA|U|1380
4V8C|1|CA|U|1381
4V8C|1|CA|C|1382
4V8C|1|CA|C|1383
4V8C|1|CA|C|1384
Current chains
- Chain CA
- 16S ribosomal RNA
Nearby chains
- Chain CC
- Transfer RNA; tRNA
- Chain CD
- Transfer RNA; tRNA
- Chain CJ
- 30S RIBOSOMAL PROTEIN S7
- Chain CL
- 30S RIBOSOMAL PROTEIN S9
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