IL_4V8C_287
3D structure
- PDB id
- 4V8C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GAUG*CUAAUC
- Length
- 10 nucleotides
- Bulged bases
- 4V8C|1|CA|U|1257, 4V8C|1|CA|A|1280, 4V8C|1|CA|U|1281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8C_287 not in the Motif Atlas
- Homologous match to IL_4LFB_052
- Geometric discrepancy: 0.1883
- The information below is about IL_4LFB_052
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_08849.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V8C|1|CA|G|1255
4V8C|1|CA|A|1256
4V8C|1|CA|U|1257
4V8C|1|CA|G|1258
*
4V8C|1|CA|C|1277
4V8C|1|CA|U|1278
4V8C|1|CA|A|1279
4V8C|1|CA|A|1280
4V8C|1|CA|U|1281
4V8C|1|CA|C|1282
Current chains
- Chain CA
- 16S ribosomal RNA
Nearby chains
- Chain CF
- 30S RIBOSOMAL PROTEIN S3
- Chain CL
- 30S RIBOSOMAL PROTEIN S9
- Chain CM
- 30S RIBOSOMAL PROTEIN S10
- Chain CQ
- 30S RIBOSOMAL PROTEIN S14
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